Cancer Cytogenetics Laboratory

INI1 Molecular

  • Synonyms: SMARCB1,BAF47, Rhabdoid tumor

    Collect

    Frozen tumor tissue and peripheral blood

    Volume Required

    0.5 x 0.5 x 0.5 cm tumor tissue and 3 cc blood

    Minimum Required

    0.5 x 0.5 x 0.2 cm tumor and 1 cc blood

    Transport

    Tumor on dry ice
    Blood at room temperature

Days Performed

Monday through Friday

Reported

2-3 weeks

Reflex Testing

SNP array

CPT

contact lab

Disease Information

Clinical Features:

Tumor with histology suggestive of atypical teratoid/rhabdoid tumor; malignant rhabdoid tumor or extra-renal rhabdoid tumor

Molecular Genetics:

Mutation and deletion analysis of INI1/SMARCB1 gene in 22q11.2

Test Methods:

Direct sequence analysis of 9 coding exons; MLPA; FISH

Detection Rate:

98%

Utility:

Diagnostic testing and germline analysis for risk assessment

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